Source code for simulate_light_emission

#!/usr/bin/python3

"""
    Simulate calibration devices using the light emission package.

    Run the application in the command line.
    There are two ways this application can be executed:

    1. Illuminator at varying distances.
    2. Illuminator and telescopes at fixed positions as defined in the layout.

    Example Usage
    -------------

    1. Simulate light emission with varying distances:

        .. code-block:: console

            simtools-simulate-light-emission --telescope MSTN-04 --site North \
            --illuminator ILLN-01 --light_source_setup variable \
            --model_version 6.0.0 --light_source_type led

    2. Simulate light emission with telescopes at fixed positions according to the layout:

        .. code-block:: console

            simtools-simulate-light-emission --telescope MSTN-04 --site North \
            --illuminator ILLN-01 --light_source_setup layout \
            --model_version 6.0.0 \
            --light_source_type led

    Command Line Arguments
    ----------------------

    --telescope (str, required)
        Telescope model name (e.g. LSTN-01, SSTS-design, SSTS-25, ...)

    --site (str, required)
        Site name (North or South).

    --illuminator (str, optional)
        Illuminator in array, e.g., ILLN-01.

    --light_source_setup (str, optional)
        Select calibration light source positioning/setup:
        - "variable" for varying distances.
        - "layout" for actual telescope positions.

    --model_version (str, optional)
        Version of the simulation model.

    --light_source_type (str, optional)
        Select calibration light source type: led (default) or laser.
        This changes the pre-compiled (simtel_array) application that is used to run the
        light emission package with. Currently we use xyzls (laser), and ls-beam can be
        accessed by using the laser option.

    --off_axis_angle (float, optional)
        Off axis angle for light source direction.

    --plot (flag, optional)
        Produce a multiple pages pdf file with the image plots.


    Example
    -------

    Simulate isotropic light source at different distances for the MSTN-04:

    .. code-block:: console

        simtools-simulate-light-emission --telescope MSTN-04 --site North \
        --illuminator ILLN-01 --light_source_setup variable \
        --model_version 6.0.0 --light_source_type led    ```

    Expected Output:

    .. code-block:: console

        light-emission package stage:
        File '/workdir/external/simtools/simtools-output/light_emission/model/
            atmprof_ecmwf_north_winter_fixed.dat' registered for atmospheric profile 99.
        Atmospheric profile 99 to be read from file '/workdir/external/simtools/
            simtools-output/light_emission/model/atmprof_ecmwf_north_winter_fixed.dat'.
        Atmospheric profile 99 with 55 levels read from file /workdir/external/
            simtools/simtools-output/light_emission/model/atmprof_ecmwf_north_winter_fixed.dat
        Initialize atmosphere ranging from 0.000 to 120.000 km a.s.l.
        IACT control parameter line: print_events 999 10 100 1000 0
        Case 1: 1 event with 1e+10 photons.
        Using IACT/ATMO package version 1.67 (2023-11-10) for CORSIKA 6.999
        Output file /workdir/external/simtools/simtools-output/light_emission/xyzls.iact.gz
            not yet created.
        Telescope output file: '/workdir/external/simtools/simtools-output/
            light_emission/xyzls.iact.gz'
        ....
        ....
        Sim_telarray stage:
        Telescope 1 triggered (1/0/0/0, mask 1), summation from 36 to 95 of 105
        Event end data has been found.
        Shower of 0.0000 TeV energy was seen in 1 of 1 cases.
        Photon statistics:
        All photons:               928518
        Used photons:              928518
        Not absorbed/max. Q.E.:    189560
        Reflected on mirror:        26815
        Camera hit:                 25574
        Pixel hit:                  25574
        Detected:                   20998
        Trigger statistics:
        Tel. triggered:             1
        Tel. + array:               1
        Early readout:              0
        Late readout:               0
        Finish data conversion ...
        Writing 13 histograms to output file.


"""


import logging
import subprocess
from pathlib import Path

import astropy.units as u

import simtools.utils.general as gen
from simtools.configuration import configurator
from simtools.corsika.corsika_histograms_visualize import save_figs_to_pdf
from simtools.model.calibration_model import CalibrationModel
from simtools.model.site_model import SiteModel
from simtools.model.telescope_model import TelescopeModel
from simtools.simtel.simulator_light_emission import SimulatorLightEmission
from simtools.visualization.visualize import plot_simtel_ctapipe


def _parse(label):
    """Parse command line configuration."""
    config = configurator.Configurator(
        label=label,
        description=(
            "Simulate the light emission by an artificial light source for calibration purposes."
        ),
    )
    config.parser.add_argument(
        "--off_axis_angle",
        help="Off axis angle for light source direction",
        type=float,
        default=0.0,
        required=False,
    )
    config.parser.add_argument(
        "--plot",
        help="Produce a multiple pages pdf file with the image plots.",
        action="store_true",
    )
    config.parser.add_argument(
        "--light_source_type",
        help="Select calibration light source type: led or laser",
        type=str,
        default="led",
        choices=["led", "laser"],
        required=False,
    )
    config.parser.add_argument(
        "--light_source_setup",
        help="Select calibration light source positioning/setup: \
              varying distances (variable), layout positions (layout)",
        type=str,
        choices=["layout", "variable"],
        default=None,
    )
    config.parser.add_argument(
        "--distances_ls",
        help="Light source distance in m (Example --distances_ls 800 1200)",
        nargs="+",
        required=False,
    )
    config.parser.add_argument(
        "--illuminator",
        help="Illuminator in array, i.e. ILLN-design",
        type=str,
        default=None,
    )
    config.parser.add_argument(
        "--telescope_file",
        help="Telescope position file (temporary)",
        type=str,
        default=None,
    )
    config.parser.add_argument(
        "--return_cleaned",
        help="ctapipe, if image should be cleaned, \
              notice as well image cleaning parameters",
        type=str,
        default=False,
        required=False,
    )
    config.parser.add_argument(
        "--picture_thresh",
        help="ctapipe, threshold above which all pixels are retained",
        type=int,
        required=False,
    )
    config.parser.add_argument(
        "--boundary_thresh",
        help="ctapipe, threshold above which pixels are retained if\
              they have a neighbor already above the picture_thresh",
        type=int,
        required=False,
    )
    config.parser.add_argument(
        "--min_neighbors",
        help="ctapipe, A picture pixel survives cleaning only if it has at\
              least this number of picture neighbors. This has no effect in\
              case keep_isolated_pixels is True",
        type=int,
        required=False,
    )
    config.parser.add_argument(
        "--level",
        help="read 5",
        type=int,
        default=5,
        required=False,
    )
    config.parser.add_argument(
        "--integration_window",
        help="ctapipe, A picture pixel survives cleaning only if it has at\
              least this number of picture neighbors. This has no effect in\
              case keep_isolated_pixels is True",
        nargs="*",
        default=["7", "3"],
        required=False,
    )
    return config.initialize(
        db_config=True,
        simulation_model="telescope",
        require_command_line=True,
    )


[docs] def distance_list(arg): """ Convert distance list to astropy quantities. Parameters ---------- arg: list List of distances. Returns ------- values: list List of distances as astropy quantities. """ try: return [float(x) * u.m for x in arg] except ValueError as exc: raise ValueError("Distances must be numeric values") from exc
[docs] def default_le_configs(le_application, args_dict): """ Define default light emission configurations. Predefined angular distribution names not requiring to read any table are "Isotropic", "Gauss:<rms>", "Rayleigh", "Cone:<angle>", and "FilledCone:<angle>", "Parallel", with all angles given in degrees, all with respect to the given direction vector (vertically downwards if missing). If the light source has a non-zero length and velocity (in units of the vacuum speed of light), it is handled as a moving source, in the given direction. Parameters ---------- le_application: str Light emission application. args_dict: dict Dictionary with command line arguments. Returns ------- default_config: dict Default light emission configuration. """ if le_application in ("xyzls", "ls-beam") and args_dict["light_source_setup"] == "variable": return { "x_pos": { "len": 1, "unit": u.Unit("cm"), "default": 0 * u.cm, "names": ["x_position"], }, "y_pos": { "len": 1, "unit": u.Unit("cm"), "default": 0 * u.cm, "names": ["y_position"], }, "z_pos": { "len": 1, "unit": u.Unit("cm"), "default": [i * 100 for i in [200, 300, 400, 600, 800, 1200, 2000, 4000]] * u.cm, "names": ["z_position"], }, "direction": { "len": 3, "unit": u.dimensionless_unscaled, "default": [0, 0, -1], "names": ["direction", "cx,cy,cz"], }, } return {}
[docs] def select_application(args_dict): """ Select sim_telarray application for light emission simulations. Parameters ---------- args_dict: dict Dictionary with command line arguments. Returns ------- le_application: str Light emission application. """ le_application = None if args_dict["light_source_type"] == "led": le_application = "xyzls" elif args_dict["light_source_type"] == "laser": le_application = "ls-beam" return le_application, args_dict["light_source_setup"]
[docs] def main(): """Simulate light emission.""" label = Path(__file__).stem args_dict, db_config = _parse(label) le_application = select_application(args_dict) default_le_config = default_le_configs(le_application[0], args_dict) logger = logging.getLogger() logger.setLevel(gen.get_log_level_from_user(args_dict["log_level"])) telescope_model = TelescopeModel( site=args_dict["site"], telescope_name=args_dict["telescope"], mongo_db_config=db_config, model_version=args_dict["model_version"], label=label, ) calibration_model = CalibrationModel( site=args_dict["site"], calibration_device_model_name=args_dict["illuminator"], mongo_db_config=db_config, model_version=args_dict["model_version"], label=label, ) site_model = SiteModel( site=args_dict["site"], mongo_db_config=db_config, model_version=args_dict["model_version"], label=label, ) if args_dict["light_source_setup"] == "variable": if args_dict["distances_ls"] is not None: default_le_config["z_pos"]["default"] = distance_list(args_dict["distances_ls"]) logger.info(f"Simulating for distances of {default_le_config['z_pos']['default']}") figures = [] for distance in default_le_config["z_pos"]["default"]: le_config = default_le_config.copy() le_config["z_pos"]["default"] = distance light_source = SimulatorLightEmission( telescope_model=telescope_model, calibration_model=calibration_model, site_model=site_model, default_le_config=le_config, le_application=le_application, simtel_path=args_dict["simtel_path"], light_source_type=args_dict["light_source_type"], ) run_script = light_source.prepare_script(generate_postscript=True, **args_dict) log_file = f"{light_source.output_directory}/logfile.log" with open(log_file, "w", encoding="utf-8") as log_file: subprocess.run( run_script, shell=False, check=False, text=True, stdout=log_file, stderr=log_file, ) try: filename = ( f"{light_source.output_directory}/" f"{light_source.le_application[0]}_" f"{light_source.le_application[1]}.simtel.gz" ) fig = plot_simtel_ctapipe( filename, cleaning_args=[ args_dict["boundary_thresh"], args_dict["picture_thresh"], args_dict["min_neighbors"], ], distance=light_source.default_le_config["z_pos"]["default"], return_cleaned=args_dict["return_cleaned"], ) figures.append(fig) except AttributeError: msg = "telescope not triggered at distance of" msg += f"{light_source.distance.to(u.meter)}" logger.warning(msg) save_figs_to_pdf( figures, f"{light_source.output_directory}/{args_dict['telescope']}_" f"{light_source.le_application[0]}_" f"{light_source.le_application[1]}.pdf", ) elif args_dict["light_source_setup"] == "layout": light_source = SimulatorLightEmission( telescope_model=telescope_model, calibration_model=calibration_model, site_model=site_model, default_le_config=default_le_config, le_application=le_application, simtel_path=args_dict["simtel_path"], light_source_type=args_dict["light_source_type"], ) run_script = light_source.prepare_script(generate_postscript=True, **args_dict) log_file = f"{light_source.output_directory}/logfile.log" with open(log_file, "w", encoding="utf-8") as log_file: subprocess.run( run_script, shell=False, check=False, text=True, stdout=log_file, stderr=log_file ) try: filename = ( f"{light_source.output_directory}/" f"{light_source.le_application[0]}_{light_source.le_application[1]}.simtel.gz" ) fig = plot_simtel_ctapipe( filename, cleaning_args=[ args_dict["boundary_thresh"], args_dict["picture_thresh"], args_dict["min_neighbors"], ], distance=light_source.distance, return_cleaned=args_dict["return_cleaned"], ) except AttributeError: msg = f"telescope not triggered at distance of {light_source.distance.to(u.meter)}" logger.warning(msg) save_figs_to_pdf( [fig], f"{light_source.output_directory}/{args_dict['telescope']}_" f"{light_source.le_application[0]}_" f"{light_source.le_application[1]}.pdf", )
if __name__ == "__main__": main()